# Install flow cell

<figure><img src="https://4216107837-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FeYTtd7c0A325muFr5lMW%2Fuploads%2F9fSahLafs4SK5XmLc2pn%2Finsert-flow-cell--short.avif?alt=media&#x26;token=f63fbfd8-72f2-461e-bd61-ac9f1bf103ee" alt=""><figcaption></figcaption></figure>

## Get things ready

You need these items:

* 1 × [BactoBox®](https://help.sbtinstruments.com/encyclopedia/item-register/bactobox-r)
* 1 × [flow cell](https://help.sbtinstruments.com/encyclopedia/item-register/consumables/flow-cell)

## Step by step

{% stepper %}
{% step %}

### Remove flow cell cover

Remove the [flow cell cover](https://help.sbtinstruments.com/encyclopedia/item-register/accessories/flow-cell-cover) (the grey lid). This reveals the flow cell compartment underneath.

<figure><img src="https://4216107837-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FeYTtd7c0A325muFr5lMW%2Fuploads%2FeCYRMgxHeX7V0Mqjb2j2%2FBactoBox--simple-outline--remove-flow-cell-cover.png?alt=media&#x26;token=94133e43-d67f-4e0c-bc50-aad7ce5f0f6a" alt="" width="375"><figcaption></figcaption></figure>
{% endstep %}

{% step %}

### Remove existing flow cell (optional)

If a flow cell is already installed, remove it. Press the clamps together. Lift the flow cell out.

{% hint style="success" %}
[Clean](https://help.sbtinstruments.com/protocols/best-practices/clean-the-setup) the flow cell before you remove it.
{% endhint %}
{% endstep %}

{% step %}

### Place the flow cell

Place the flow cell loosely onto the metal bracket.

<figure><img src="https://4216107837-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FeYTtd7c0A325muFr5lMW%2Fuploads%2FE6kNejhdkwkmMCi48t0b%2Fflow-cell--simple-outline--insert-into-bactobox.png?alt=media&#x26;token=4cb28262-85c1-4c29-bed5-2111b39e7f4b" alt="" width="375"><figcaption></figcaption></figure>
{% endstep %}

{% step %}

### Press flow cell into place

First, press *firmly* on the top section labeled (1) until you hear a distinct click.

{% hint style="warning" %}
Make sure to press the cartridge itself and not the clamp.
{% endhint %}

Second, press *firmly* on the lower section labeled (2) until you hear a second click.

<figure><img src="https://4216107837-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FeYTtd7c0A325muFr5lMW%2Fuploads%2FLqiDfliWi5aLLP9OblFV%2Fflow-cell--simple-outline--click-into-place.png?alt=media&#x26;token=c716ac4b-79e4-4e6f-a4fc-accce74afc32" alt="" width="375"><figcaption></figcaption></figure>

{% hint style="success" %}
**Ensure that everything works**

* [ ] The user interface no longer displays the "Insert flow cell" animation.
* [ ] The flow cell has a slight springy feel when you press the center section.
  {% endhint %}
  {% endstep %}

{% step %}

### Insert flow cell cover

Insert the flow cell cover (grey lid) on top of the flow cell compartment.

{% hint style="info" %}
The flow cell cover protects the flow cell compartment against dust and liquid.
{% endhint %}

<figure><img src="https://4216107837-files.gitbook.io/~/files/v0/b/gitbook-x-prod.appspot.com/o/spaces%2FeYTtd7c0A325muFr5lMW%2Fuploads%2FXX3vK3aPmLd2ltfmE6zy%2FBactoBox--simple-outline--put-flow-cell-cover-on.png?alt=media&#x26;token=7dff8edc-5452-434b-8216-135b64cba96a" alt="" width="375"><figcaption></figcaption></figure>
{% endstep %}

{% step %}

### That is it!

Flow cell installation is done.

{% hint style="success" %}

### Replace the external filter when you replace the flow cell <a href="#replace-the-external-filter" id="replace-the-external-filter"></a>

It is good practice to replace the [external filter](https://help.sbtinstruments.com/encyclopedia/item-register/consumables/external-filter) whenever you replace the flow cell. See [Install tubing kit](https://help.sbtinstruments.com/getting-started/installation/install-tubing-kit) for details.

[run-qc-test](https://help.sbtinstruments.com/getting-started/qc-test/run-qc-test "mention") **when you replace the external filter.**
{% endhint %}

{% hint style="info" %}

### The flow cell is worn out after 250 measurements <a href="#the-flow-cell-lasts-for-250-measurements" id="the-flow-cell-lasts-for-250-measurements"></a>

After 250 measurements, the flow cell reaches its usage limit and is automatically locked. This limit is set to guarantee the factory calibration of the flow cell.
{% endhint %}
{% endstep %}
{% endstepper %}


---

# Agent Instructions: Querying This Documentation

If you need additional information that is not directly available in this page, you can query the documentation dynamically by asking a question.

Perform an HTTP GET request on the current page URL with the `ask` query parameter:

```
GET https://help.sbtinstruments.com/getting-started/installation/install-flow-cell.md?ask=<question>
```

The question should be specific, self-contained, and written in natural language.
The response will contain a direct answer to the question and relevant excerpts and sources from the documentation.

Use this mechanism when the answer is not explicitly present in the current page, you need clarification or additional context, or you want to retrieve related documentation sections.
