> For the complete documentation index, see [llms.txt](https://help.sbtinstruments.com/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://help.sbtinstruments.com/mpd/encyclopedia/mpd-basics.md).

# MPD basics

*Microbial process development* is an activity within [bioprocess engineering](https://en.wikipedia.org/wiki/Biochemical_engineering). Microbial process development results in a [Bioprocess](/mpd/encyclopedia/bioprocess.md) that, in turn, results in a [Bioproduct](/mpd/encyclopedia/bioproduct.md).

<img src="/files/mVzzpx5WgGixxJ8ZB2QZ" alt="Terminology surrounding microbial process development." class="gitbook-drawing">

## Components in microbial process development

Microbial process development is a complex activity that consists of several components. Below, we give a brief (and incomplete) overview.

### Strain development

Selection or engineering of a microbial host. E.g., *E. coli*, *Saccharomyces cerevisiae*, et&#x63;*.* This includes genetic modifications such as:

* Pathway insertion or optimization
* Knockouts to reduce byproducts
* Promoter tuning for expression control

### Media and growth optimization

Designing nutrient composition. E.g., carbon, nitrogen, trace elements.

Controlling process parameters. E.g., pH, temperature, oxygen transfer.

### Feeding strategy

Batch, fed-batch, or continuous cultivation strategies. Feeding profiles. E.g., glucose-limited feeding to avoid overflow metabolism.

Bioreactor configuration and mixing.

### Scaling

Scale from lab to pilot to production facilities. In practice, to transition from shake flasks to bench-top bioreactors to industrial fermenters.

While scaling, you must address several new challenges. E.g., oxygen transfer limitations, shear stress, heat removal.

### Monitoring

Understand what's going during the bioprocess.

* OD (optical density)
* pH
* DO (dissolved oxygen)
* Metabolites
* Plate counts (CFU)
* BactoBox® (cells/mL)
* etc.

### Downstream considerations

This is a huge topic on its own. The basics are:

* Bioproduct isolation (recovery)
* Bioproduct concentration, purification, dehydration, etc.


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